JustBio Axion MEA Tools Axion MEA MAESTRO Raw File Processing Provide here your data set to process: File Names: Must be of forrmat PLATEn_DATE.csv or PLATEn_DATE(001)_NeuralMetrics.csv PLATEn = PLATE1 or PLATE2 ... DATE format = YYYY.MM.DD (like 2015.04.23) Example of vaid names: - PLATE1_2015.05.29.csv - PLATE1_2015.05.29(003)_neuralMetrics .csv Content: Can be used with sets of 12, 48 or 96 wells Note: - If you miss a plate in your set, you can use a file with no values. We provide here an example: download a template (12 wells) or download a template (48 wells). - All files in set MUST be of same algorithm. Multiple raw files: Drag and drop a CSV file Remove Uploaded Image (use a recent browser and select all files to upload at once) Parameter to extract: Choose One... Number of Spikes Mean Firing Rate (Hz) ISI Coefficient of Variation Number of Bursts Burst Duration - Avg (sec) Burst Duration - Std (sec) Number of Spikes per Burst - Avg Number of Spikes per Burst - Std Mean ISI within Burst - Avg Mean ISI within Burst - Std Median ISI within Burst - Avg Median ISI within Burst - Std Inter-Burst Interval - Avg (sec) Inter-Burst Interval - Std (sec) Burst Frequency (Hz) IBI Coefficient of Variation Normalized Duration IQR Burst Percentage Number of Spikes Mean Firing Rate (Hz) ISI Coefficient of Variation Number of Active Electrodes Weighted Mean Firing Rate (Hz) Number of Bursts Burst Duration - Avg (sec) Burst Duration - Std (sec) Number of Spikes per Burst - Avg Number of Spikes per Burst - Std Mean ISI within Burst - Avg Mean ISI within Burst - Std Median ISI within Burst - Avg Median ISI within Burst - Std Inter-Burst Interval - Avg (sec) Inter-Burst Interval - Std (sec) Burst Frequency - Avg (Hz) Burst Frequency - Std (Hz) Normalized Duration IQR - Avg Normalized Duration IQR - Std IBI Coefficient of Variation - Avg IBI Coefficient of Variation - Std Burst Percentage Number of Network Bursts Network Burst Frequency Network Burst Duration - Avg (sec) Network Burst Duration - Std (sec) Number of Spikes per Network Burst - Avg Number of Spikes per Network Burst - Std Number of Elecs Participating in Burst - Avg Number of Elecs Participating in Burst - Std Number of Spikes per Network Burst per Channel - Avg Number of Spikes per Network Burst per Channel - Std Network Burst Percentage Network IBI Coefficient of Variation Network Normalized Duration IQR Area Under Normalized Cross-Correlation Area Under Cross-Correlation Half Width at Half Height of Normalized Cross-Correlation Half Width at Half Height of Cross-Correlation Synchrony Index Kreuz SPIKE Distance OPTIONAL: Divide by (ratio): Choose One... Number of Spikes Mean Firing Rate (Hz) ISI Coefficient of Variation Number of Bursts Burst Duration - Avg (sec) Burst Duration - Std (sec) Number of Spikes per Burst - Avg Number of Spikes per Burst - Std Mean ISI within Burst - Avg Mean ISI within Burst - Std Median ISI within Burst - Avg Median ISI within Burst - Std Inter-Burst Interval - Avg (sec) Inter-Burst Interval - Std (sec) Burst Frequency (Hz) IBI Coefficient of Variation Normalized Duration IQR Burst Percentage Number of Spikes Mean Firing Rate (Hz) ISI Coefficient of Variation Number of Active Electrodes Weighted Mean Firing Rate (Hz) Number of Bursts Burst Duration - Avg (sec) Burst Duration - Std (sec) Number of Spikes per Burst - Avg Number of Spikes per Burst - Std Mean ISI within Burst - Avg Mean ISI within Burst - Std Median ISI within Burst - Avg Median ISI within Burst - Std Inter-Burst Interval - Avg (sec) Inter-Burst Interval - Std (sec) Burst Frequency - Avg (Hz) Burst Frequency - Std (Hz) Normalized Duration IQR - Avg Normalized Duration IQR - Std IBI Coefficient of Variation - Avg IBI Coefficient of Variation - Std Burst Percentage Number of Network Bursts Network Burst Frequency Network Burst Duration - Avg (sec) Network Burst Duration - Std (sec) Number of Spikes per Network Burst - Avg Number of Spikes per Network Burst - Std Number of Elecs Participating in Burst - Avg Number of Elecs Participating in Burst - Std Number of Spikes per Network Burst per Channel - Avg Number of Spikes per Network Burst per Channel - Std Network Burst Percentage Network IBI Coefficient of Variation Network Normalized Duration IQR Area Under Normalized Cross-Correlation Area Under Cross-Correlation Half Width at Half Height of Normalized Cross-Correlation Half Width at Half Height of Cross-Correlation Synchrony Index Kreuz SPIKE Distance (this will output the ratio of both fields) CSV separator: Tab ; ,